PDB-MCP-Server
PDB-MCP-Server is an MCP server. Its repository has 28 GitHub stars and is licensed under NOASSERTION; we last read it on 2026-10-22.
This server provides access to the Protein Data Bank (PDB) using Model Context Protocol (MCP) and requires no specific credentials.
Install
MCP servers are packaged differently from each other -- some run via npx, some as a Docker image, some as a plain script you clone and run. PDB-MCP-Server’s own README did not state one plainly enough for this page to quote it rather than guess, so it will not guess. The repository below states it.
What it reaches, and what it needs
Maintenance
A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies.
Common questions about PDB-MCP-Server
- What does PDB-MCP-Server do?
- This server provides access to the Protein Data Bank (PDB) using Model Context Protocol (MCP) and requires no specific credentials.
- How do I install PDB-MCP-Server?
- Its README did not state an install command plainly enough for us to quote one, so we do not guess. The repository has the instructions: https://github.com/Augmented-Nature/PDB-MCP-Server
- Is PDB-MCP-Server official and is it maintained?
- We found nothing naming it as a vendor’s official server. Its repository has 28 GitHub stars and its state in our directory is listed. Its last commit we recorded was on 2025-12-21.
- What licence does PDB-MCP-Server use?
- The repository declares the NOASSERTION licence.